The X-Files
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| Award | Year (↑) | Category | Nominee / Winner | Person |
|---|---|---|---|---|
| Saturn Award | 2002 | Best Actor | Nominee | Robert Patrick |
| Saturn Award | 2002 | Best Actress | Nominee | Gillian Anderson |
| Wand Award | 2002 | Show You'll Miss the Most | Nominee | |
| Saturn Award | 2002 | Best Supporting Actress | Nominee | Annabeth Gish |
| Emmy Award | 2002 | Outstanding Music Composition (Dramatic Underscore) for a Series | Nominee | Mark Snow |
| Wand Award | 2002 | Most Disappointing | Nominee | |
| American Cinematographers Award | 2002 | Outstanding Cinematography in a Television Series | Nominee | Bill Roe |
| Online Television Academy Award | 2002 | Best Makeup and Hair in a Television Series | Nominee | |
| Golden Reel Award (MPSE) | 2002 | Outstanding Sound Editing in Episodic Television | Nominee | |
| Amy Award | 2002 | Call the Voodoo Doctor, I Want to Resurrect __________ | Nominee | The Lone Gunmen |
| RATTY Award | 2002 | Best Lead Actor in a Science Fiction Series | Winner | Robert Patrick |
| RATTY Award | 2002 | Best Lead Actress in a Science Fiction Series | Nominee | Gillian Anderson |
| Wand Award | 2002 | Star You'll Miss the Most | Nominee | Gillian Anderson |
| RATTY Award | 2002 | Best Writing in a Science Fiction Series | Nominee | Chris Carter |
| RATTY Award | 2002 | Best Directing in a Science Fiction Series | Nominee | Chris Carter |
| RATTY Award | 2002 | Best Guest Actor in a Science Fiction Series | Nominee | Burt Reynolds |
| TV Guide's All Time Greatest/Worst Lists | 2002 | 50 Greatest TV Shows (#37) | Winner | |
| International Monitor Award | 2002 | Best Color Correction in a Film Originated Television Series | Finalist | |
| Cinema Audio Society Award | 2003 | Outstanding Achievement in Sound Mixing for a Television Series | Nominee | |
| American Cinematographers Award | 2003 | Outstanding Cinematography in a Television Series | Nominee | Bill Roe |
| Golden Reel Award (MPSE) | 2003 | Outstanding Sound Editing in Episodic Television | Nominee | |
| Saturn Award | 2003 | Best DVD TV Programming Release | Nominee | |
| TV DVD Awards | 2004 | Best Special Feature | Nominee | |
| TV Guide's All Time Greatest/Worst Lists | 2004 | 25 Top Cult TV Shows (#2) | Winner | |
| E!'s 101 Lists | 2004 | 101 Reasons the '90s Ruled (#59) | Winner | |
| TV Guide's All Time Greatest/Worst Lists | 2004 | 50 Things To Love About TV (#17) | Winner | Fox Mulder |
| Bravo's All Time Greatest/Worst Lists | 2004 | 100 Greatest TV Characters (#32) | Winner | Gillian Anderson; David Duchovny |
| TV Guide's All Time Greatest/Worst Lists | 2004 | 25 Greatest SciFi TV Stars (#7) | Winner | Fox Mulder |
| Broadcast Magazine (UK) Best/Worst Imports | 2004 | Ten Best US Shows (#7) | Voted | |
| TV Guide's All Time Greatest/Worst Lists | 2005 | 20 Hottest TV Kisses (#16) | Winner | Mulder & Scully |
| TV Land Award | 2007 | The ''Hey! It's...!'' Award (Favorite Cameo or Guest Star) | Nominee | Jodie Foster |
| Time Magazine's 100 Best TV Shows | 2007 | One of the 100 Best TV Shows of All-Time | Winner | |
| TelevisionWeek's Best of 25 Years | 2007 | Broadcast's Best of Past 25 Years | Winner | |
| Home Entertainment Award | 2008 | Archival TV Series of the Year | Nominee | |
| Rotten Tomatoes | 2008 | 50 Best TV Adaptations of All Time (#33) | Winner | The X-Files: Fight the Future (1998) |
| EW's All Time Greatest/Worst Lists | 2008 | 100 New TV Classics (#4) | Winner | |
| Empire | 2008 | 50 Greatest TV Shows of All Time (#9) | Winner |
